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Original Article (507)
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HisCoM-PAGE: software for hierarchical structural component models for pathway analysis of gene expression data
Lydia Mok
, Taesung Park
Genomics Inform.
2019;17(4):e45. Published online December 23, 2019
DOI:
https://doi.org/10.5808/GI.2019.17.4.e45
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Fully connecting the Observational Health Data Science and Informatics (OHDSI) initiative with the world of linked open data
Juan M. Banda
Genomics Inform.
2019;17(2):e13. Published online June 11, 2019
DOI:
https://doi.org/10.5808/GI.2019.17.2.e13
Cited By 3
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Biotea-2-Bioschemas, facilitating structured markup for semantically annotated scholarly publications
Leyla Garcia
, Olga Giraldo
, Alexander Garcia
, Dietrich Rebholz-Schuhmann
Genomics Inform.
2019;17(2):e14. Published online June 19, 2019
DOI:
https://doi.org/10.5808/GI.2019.17.2.e14
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PharmacoNER Tagger: a deep learning-based tool for automatically finding chemicals and drugs in Spanish medical texts
Jordi Armengol-Estapé
, Felipe Soares
, Montserrat Marimon
, Martin Krallinger
Genomics Inform.
2019;17(2):e15. Published online June 19, 2019
DOI:
https://doi.org/10.5808/GI.2019.17.2.e15
Cited By 5
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Improving spaCy dependency annotation and PoS tagging web service using independent NER services
Nico Colic
, Fabio Rinaldi
Genomics Inform.
2019;17(2):e21. Published online June 24, 2019
DOI:
https://doi.org/10.5808/GI.2019.17.2.e21
Cited By 6
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OryzaGP: rice gene and protein dataset for named-entity recognition
Pierre Larmande
, Huy Do
, Yue Wang
Genomics Inform.
2019;17(2):e17. Published online June 26, 2019
DOI:
https://doi.org/10.5808/GI.2019.17.2.e17
Cited By 2
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Towards cross-platform interoperability for machine-assisted text annotation
Richard Eckart de Castilho
, Nancy Ide
, Jin-Dong Kim
, Jan-Christoph Klie
, Keith Suderman
Genomics Inform.
2019;17(2):e19. Published online June 26, 2019
DOI:
https://doi.org/10.5808/GI.2019.17.2.e19
Cited By 2
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Improving the CONTES method for normalizing biomedical text entities with concepts from an ontology with (almost) no training data
Arnaud Ferré
, Mouhamadou Ba
, Robert Bossy
Genomics Inform.
2019;17(2):e20. Published online June 27, 2019
DOI:
https://doi.org/10.5808/GI.2019.17.2.e20
Cited By 1
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HisCoM-mimi: Software for Hierarchical Structural Component Analysis for miRNA-mRNA Integration Model for Binary Phenotypes
Yongkang Kim
, Taesung Park
Genomics Inform.
2019;17(1):e10. Published online March 31, 2019
DOI:
https://doi.org/10.5808/GI.2019.17.1.e10
Cited By 1
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COEX-Seq: Convert a Variety of Measurements of Gene Expression in RNA-Seq
Sang Cheol Kim
, Donghyeon Yu
, Seong Beom Cho
Genomics Inform.
2018;16(4):e36. Published online December 28, 2018
DOI:
https://doi.org/10.5808/GI.2018.16.4.e36
Cited By 8
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EFMDR-Fast: An Application of Empirical Fuzzy Multifactor Dimensionality Reduction for Fast Execution
Sangseob Leem
, Taesung Park
Genomics Inform.
2018;16(4):e37. Published online December 28, 2018
DOI:
https://doi.org/10.5808/GI.2018.16.4.e37
Cited By 4
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HisCoM-GGI: Software for Hierarchical Structural Component Analysis of Gene-Gene Interactions
Sungkyoung Choi
, Sungyoung Lee
, Taesung Park
Genomics Inform.
2018;16(4):e38. Published online December 28, 2018
DOI:
https://doi.org/10.5808/GI.2018.16.4.e38
Cited By 2
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Integration of a Large-Scale Genetic Analysis Workbench Increases the Accessibility of a High-Performance Pathway-Based Analysis Method
Sungyoung Lee
, Taesung Park
Genomics Inform.
2018;16(4):e39. Published online December 28, 2018
DOI:
https://doi.org/10.5808/GI.2018.16.4.e39
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GNI Corpus Version 1.0: Annotated Full-Text Corpus of
Genomics & Informatics
to Support Biomedical Information Extraction
So-Yeon Oh
, Ji-Hyeon Kim
, Seo-Jin Kim
, Hee-Jo Nam
, Hyun-Seok Park
Genomics Inform.
2018;16(3):75-77. Published online September 30, 2018
DOI:
https://doi.org/10.5808/GI.2018.16.3.75
Cited By 6
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IVAG: An Integrative Visualization Application for Various Types of Genomic Data Based on R-Shiny and the Docker Platform
Tae-Rim Lee
, Jin Mo Ahn
, Gyuhee Kim
, Sangsoo Kim
Genomics Inform.
2017;15(4):178-182. Published online December 29, 2017
DOI:
https://doi.org/10.5808/GI.2017.15.4.178
Cited By 1
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