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Review article

December 31, 2021


Statistical models and computational tools for predicting complex traits and diseases
Wonil Chung
Genomics Inform. 2021;19(4):e36.

Predicting individual traits and diseases from genetic variants is critical to fulfilling the promise of personalized medicine. The genetic variants from genome-wide association studies (GWAS), including variants well below GWAS...

Original article

December 31, 2021


Validation and genetic heritability estimation of known type 2 diabetes related variants in the Korean population
Hye-Mi Jang, Mi Yeong Hwang, Bong-Jo Kim, Young Jin Kim
Genomics Inform. 2021;19(4):e37.

Genome-wide association studies (GWASs) facilitated the discovery of countless disease-associated variants. However, GWASs have mostly been conducted in European ancestry samples. Recent studies have reported that these European-based association results...

Original article

December 31, 2021


Identification of rare coding variants associated with Kawasaki disease by whole exome sequencing
Jae-Jung Kim, Young Mi Hong, Sin Weon Yun, Kyung-Yil Lee, Kyung Lim Yoon, Myung-Ki Han, Gi Beom Kim, Hong-Ryang Kil, Min Seob Song, Hyoung Doo Lee, et al.
Genomics Inform. 2021;19(4):e38.

Kawasaki disease (KD) is an acute pediatric vasculitis that affects genetically susceptible infants and children. To identify coding variants that influence susceptibility to KD, we conducted whole exome sequencing of...

Original article

December 31, 2021


Knockdown of vps54 aggravates tamoxifen-induced cytotoxicity in fission yeast
Sol Lee, Miyoung Nam, Ah-Reum Lee, Seung-Tae Baek, Min Jung Kim, Ju Seong Kim, Andrew Hyunsoo Kong, Minho Lee, Sook-Jeong Lee, Seon-Young Kim, et al.
Genomics Inform. 2021;19(4):e39.

Tamoxifen (TAM) is an anticancer drug used to treat estrogen receptor (ER)‒positive breast cancer. However, its ER-independent cytotoxic and antifungal activities have prompted debates on its mechanism of action. To...

Original article

December 31, 2021


Correlation-based and feature-driven mutation signature analyses to identify genetic features associated with DNA mutagenic processes in cancer genomes
Hye Young Jeong, Jinseon Yoo, Hyunwoo Kim, Tae-Min Kim
Genomics Inform. 2021;19(4):e40.

Mutation signatures represent unique sequence footprints of somatic mutations resulting from specific DNA mutagenic and repair processes. However, their causal associations and the potential utility for genome research remain largely...

Original article

December 31, 2021


Development of an RNA sequencing panel to detect gene fusions in thyroid cancer
Dongmoung Kim, Seung-Hyun Jung, Yeun-Jun Chung
Genomics Inform. 2021;19(4):e41.

In addition to mutations and copy number alterations, gene fusions are commonly identified in cancers. In thyroid cancer, fusions of important cancer-related genes have been commonly reported; however, extant panels...

Original article

December 31, 2021


Potential biomarkers and signaling pathways associated with the pathogenesis of primary salivary gland carcinoma: a bioinformatics study
Zeynab Bayat, Fatemeh Ahmadi-Motamayel, Mohadeseh Salimi Parsa, Amir Taherkhani
Genomics Inform. 2021;19(4):e42.

Salivary gland carcinoma (SGC) is rare cancer, constituting 6% of neoplasms in the head and neck area. The most responsible genes and pathways involved in the pathology of this disorder...

Original article

December 31, 2021


In-silico characterization and structure-based functional annotation of a hypothetical protein from Campylobacter jejuni involved in propionate catabolism
Lincon Mazumder, Mehedi Hasan, Ahmed Abu Rus'd, Mohammad Ariful Islam
Genomics Inform. 2021;19(4):e43.

Campylobacter jejuni is one of the most prevalent organisms associated with foodborne illness across the globe causing campylobacteriosis and gastritis. Many proteins of C. jejuni are still unidentified. The purpose...

Original article

December 31, 2021


Genetic analysis of the postsynaptic transmembrane X-linked neuroligin 3 gene in autism
Rajat Hegde, Smita Hegde, Suyamindra S. Kulkarni, Aditya Pandurangi, Pramod B. Gai, Kusal K. Das
Genomics Inform. 2021;19(4):e44.

Autism is a complex neurodevelopmental disorder, the prevalence of which has increased drastically in India in recent years. Neuroligin is a type I transmembrane protein that plays a crucial role...

Original article

December 31, 2021


Characterization of transcription factor genes related to cold tolerance in Brassica napus
Mayur Mukut Murlidhar Sharma, Rahul Vasudeo Ramekar, Nam-Il Park, Ik-Young Choi, Seon-Kang Choi, Kyong-Cheul Park
Genomics Inform. 2021;19(4):e45.

Brassica napus is the third most important oilseed crop in the world; however, in Korea, it is greatly affected by cold stress, limiting seed growth and production. Plants have developed...

Original article

December 31, 2021


Molecular docking of bioactive compounds derived from Moringa oleifera with p53 protein in the apoptosis pathway of oral squamous cell carcinoma
Sonali Rath, Manaswini Jagadeb, Ruchi Bhuyan
Genomics Inform. 2021;19(4):e46.

Moringa oleifera is nowadays raising as the most preferred medicinal plant, as every part of the moringa plant has potential bioactive compounds which can be used as herbal medicines. Some...

Original article

December 31, 2021


An in-silico approach to design potential siRNAs against the ORF57 of Kaposi’s sarcoma-associated herpesvirus
Anisur Rahman, Shipan Das Gupta, Md. Anisur Rahman, Saheda Tamanna
Genomics Inform. 2021;19(4):e47.

Kaposi's sarcoma-associated herpesvirus (KSHV) is one of the few human oncogenic viruses, which causes a variety of malignancies, including Kaposi's sarcoma, multicentric Castleman disease, and primary effusion lymphoma, particularly in...

Original article

December 31, 2021


Microsecond molecular dynamics simulations revealed the inhibitory potency of amiloride analogs against SARS-CoV-2 E viroporin
Abdullah All Jaber, Zeshan Mahmud Chowdhury, Arittra Bhattacharjee, Muntahi Mourin, Chaman Ara Keya, Zaied Ahmed Bhuyan
Genomics Inform. 2021;19(4):e48.

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) encodes small envelope protein (E) that plays a major role in viral assembly, release, pathogenesis, and host inflammation. Previous studies demonstrated that pyrazine...

Application note

December 31, 2021


High-performance computing for SARS-CoV-2 RNAs clustering: a data science‒based genomics approach
Anas Oujja, Mohamed Riduan Abid, Jaouad Boumhidi, Safae Bourhnane, Asmaa Mourhir, Fatima Merchant, Driss Benhaddou
Genomics Inform. 2021;19(4):e49.

Nowadays, Genomic data constitutes one of the fastest growing datasets in the world. As of 2025, it is supposed to become the fourth largest source of Big Data, and thus...

Opinion

December 31, 2021


COVID-19 pandemic: Is it the right time to develop interconnected national biomedical registries?
Athanasios S. Kotoulas
Genomics Inform. 2021;19(4):e50.

Opinion

December 31, 2021


Estimation of the journal distance of Genomics & Informatics from other bioinformatics-driven journals, 2003-2018
Ji-Hye Oh, Hee-Jo Nam, Hyun-Seok Park
Genomics Inform. 2021;19(4):e51.

This study explored the trends of Genomics & Informatics during the period of 2003-2018 in comparison with 11 other scholarly journals: BMC Bioinformatics, Algorithms for Molecular Biology: AMB, BMC Systems...
Current Issue
Volume 19(4); Dec 2021
Editor’s introduction to this issue (G&I 19:4, 2021)
Taesung Park
Genomics Inform. 2021;19(4):e35.

Editorial

December 31, 2021
Statistical models and computational tools for predicting complex traits and diseases
Wonil Chung
Genomics Inform. 2021;19(4):e36.

Review article

December 31, 2021
Validation and genetic heritability estimation of known type 2 diabetes related variants in the Korean population
Hye-Mi Jang, Mi Yeong Hwang, Bong-Jo Kim, Young Jin Kim
Genomics Inform. 2021;19(4):e37.

Original article

December 31, 2021
Identification of rare coding variants associated with Kawasaki disease by whole exome sequencing
Jae-Jung Kim, Young Mi Hong, Sin Weon Yun, Kyung-Yil Lee, Kyung Lim Yoon, Myung-Ki Han, Gi Beom Kim, Hong-Ryang Kil, Min Seob Song, Hyoung Doo Lee, et al.
Genomics Inform. 2021;19(4):e38.

Original article

December 31, 2021
Knockdown of vps54 aggravates tamoxifen-induced cytotoxicity in fission yeast
Sol Lee, Miyoung Nam, Ah-Reum Lee, Seung-Tae Baek, Min Jung Kim, Ju Seong Kim, Andrew Hyunsoo Kong, Minho Lee, Sook-Jeong Lee, Seon-Young Kim, et al.
Genomics Inform. 2021;19(4):e39.

Original article

December 31, 2021
Correlation-based and feature-driven mutation signature analyses to identify genetic features associated with DNA mutagenic processes in cancer genomes
Hye Young Jeong, Jinseon Yoo, Hyunwoo Kim, Tae-Min Kim
Genomics Inform. 2021;19(4):e40.

Original article

December 31, 2021
Development of an RNA sequencing panel to detect gene fusions in thyroid cancer
Dongmoung Kim, Seung-Hyun Jung, Yeun-Jun Chung
Genomics Inform. 2021;19(4):e41.

Original article

December 31, 2021
Potential biomarkers and signaling pathways associated with the pathogenesis of primary salivary gland carcinoma: a bioinformatics study
Zeynab Bayat, Fatemeh Ahmadi-Motamayel, Mohadeseh Salimi Parsa, Amir Taherkhani
Genomics Inform. 2021;19(4):e42.

Original article

December 31, 2021
In-silico characterization and structure-based functional annotation of a hypothetical protein from Campylobacter jejuni involved in propionate catabolism
Lincon Mazumder, Mehedi Hasan, Ahmed Abu Rus'd, Mohammad Ariful Islam
Genomics Inform. 2021;19(4):e43.

Original article

December 31, 2021
Genetic analysis of the postsynaptic transmembrane X-linked neuroligin 3 gene in autism
Rajat Hegde, Smita Hegde, Suyamindra S. Kulkarni, Aditya Pandurangi, Pramod B. Gai, Kusal K. Das
Genomics Inform. 2021;19(4):e44.

Original article

December 31, 2021
Characterization of transcription factor genes related to cold tolerance in Brassica napus
Mayur Mukut Murlidhar Sharma, Rahul Vasudeo Ramekar, Nam-Il Park, Ik-Young Choi, Seon-Kang Choi, Kyong-Cheul Park
Genomics Inform. 2021;19(4):e45.

Original article

December 31, 2021
Molecular docking of bioactive compounds derived from Moringa oleifera with p53 protein in the apoptosis pathway of oral squamous cell carcinoma
Sonali Rath, Manaswini Jagadeb, Ruchi Bhuyan
Genomics Inform. 2021;19(4):e46.

Original article

December 31, 2021
An in-silico approach to design potential siRNAs against the ORF57 of Kaposi’s sarcoma-associated herpesvirus
Anisur Rahman, Shipan Das Gupta, Md. Anisur Rahman, Saheda Tamanna
Genomics Inform. 2021;19(4):e47.

Original article

December 31, 2021
Microsecond molecular dynamics simulations revealed the inhibitory potency of amiloride analogs against SARS-CoV-2 E viroporin
Abdullah All Jaber, Zeshan Mahmud Chowdhury, Arittra Bhattacharjee, Muntahi Mourin, Chaman Ara Keya, Zaied Ahmed Bhuyan
Genomics Inform. 2021;19(4):e48.

Original article

December 31, 2021
High-performance computing for SARS-CoV-2 RNAs clustering: a data science‒based genomics approach
Anas Oujja, Mohamed Riduan Abid, Jaouad Boumhidi, Safae Bourhnane, Asmaa Mourhir, Fatima Merchant, Driss Benhaddou
Genomics Inform. 2021;19(4):e49.

Application note

December 31, 2021
COVID-19 pandemic: Is it the right time to develop interconnected national biomedical registries?
Athanasios S. Kotoulas
Genomics Inform. 2021;19(4):e50.

Opinion

December 31, 2021
Estimation of the journal distance of Genomics & Informatics from other bioinformatics-driven journals, 2003-2018
Ji-Hye Oh, Hee-Jo Nam, Hyun-Seok Park
Genomics Inform. 2021;19(4):e51.

Opinion

December 31, 2021

View More

Most View Most Cited
An in-silico approach to design potential siRNAs against the ORF57 of Kaposi’s sarcoma-associated herpesvirus Anisur Rahman, Shipan Das Gupta, Md. Anisur Rahman, Saheda Tamanna Genomics Inform. 2021;19(4):e47. Subrata K. Biswas, Sonchita R. Mudi Genomics Inform. 2020;18(4):e44. Cited By 13
COVID-19 pandemic: Is it the right time to develop interconnected national biomedical registries? Athanasios S. Kotoulas Genomics Inform. 2021;19(4):e50. Ramya Tekumalla, Juan M. Banda Genomics Inform. 2020;18(2):e16. Cited By 7
In-silico characterization and structure-based functional annotation of a hypothetical protein from Campylobacter jejuni involved in propionate catabolism Lincon Mazumder, Mehedi Hasan, Ahmed Abu Rus'd, Mohammad Ariful Islam Genomics Inform. 2021;19(4):e43. Karl R. Franke, Erin L. Crowgey Genomics Inform. 2020;18(1):e10. Cited By 5
Genetic analysis of the postsynaptic transmembrane X-linked neuroligin 3 gene in autism Rajat Hegde, Smita Hegde, Suyamindra S. Kulkarni, Aditya Pandurangi, Pramod B. Gai, Kusal K. Das Genomics Inform. 2021;19(4):e44. Danbi Seo, Dain Kim, Yeonsoo Chae, Wanyeon Kim Genomics Inform. 2020;18(4):e36. Cited By 5
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