PublisherDOIYearVolumeIssuePageTitleAuthor(s)Link
BMC Bioinformatics10.1186/s12859-019-2694-8201920S4Analyzing big datasets of genomic sequences: fast and scalable collection of k-mer statisticsUmberto Ferraro Petrillo, Mara Sorella, Giuseppe Cattaneo, Raffaele Giancarlo, Simona E. Rombohttp://link.springer.com/content/pdf/10.1186/s12859-019-2694-8.pdf, http://link.springer.com/article/10.1186/s12859-019-2694-8/fulltext.html, http://link.springer.com/content/pdf/10.1186/s12859-019-2694-8.pdf
BMC Bioinformatics10.1186/s12859-019-3159-92019201PyGMQL: scalable data extraction and analysis for heterogeneous genomic datasetsLuca Nanni, Pietro Pinoli, Arif Canakoglu, Stefano Cerihttp://link.springer.com/content/pdf/10.1186/s12859-019-3159-9.pdf, http://link.springer.com/article/10.1186/s12859-019-3159-9/fulltext.html, http://link.springer.com/content/pdf/10.1186/s12859-019-3159-9.pdf
BMC Bioinformatics10.1186/1471-2105-9-533200891GPAT: Retrieval of genomic annotation from large genomic position datasetsArnaud Krebs, Mattia Frontini, Làszlò Torahttp://link.springer.com/content/pdf/10.1186/1471-2105-9-533.pdf, http://link.springer.com/article/10.1186/1471-2105-9-533/fulltext.html, http://link.springer.com/content/pdf/10.1186/1471-2105-9-533.pdf
Genomics & Informatics10.5808/gi.2020.18.1.e82020181e8Bioinformatics services for analyzing massive genomic datasetsGunhwan Ko, Pan-Gyu Kim, Youngbum Cho, Seongmun Jeong, Jae-Yoon Kim, Kyoung Hyoun Kim, Ho-Yeon Lee, Jiyeon Han, Namhee Yu, Seokjin Ham, Insoon Jang, Byunghee Kang, Sunguk Shin, Lian Kim, Seung-Won Lee, Dougu Nam, Jihyun F. Kim, Namshin Kim, Seon-Young Kim, Sanghyuk Lee, Tae-Young Roh, Byungwook Leehttp://genominfo.org/upload/pdf/gi-2020-18-1-e8.pdf, http://genominfo.org/journal/view.php?doi=10.5808/GI.2020.18.1.e8, http://genominfo.org/upload/pdf/gi-2020-18-1-e8.pdf
BMC Bioinformatics10.1186/1471-2105-10-3052009101Strategies for analyzing highly enriched IP-chip datasetsSimon RV Knott, Christopher J Viggiani, Oscar M Aparicio, Simon Tavaréhttp://link.springer.com/content/pdf/10.1186/1471-2105-10-305.pdf, http://link.springer.com/article/10.1186/1471-2105-10-305/fulltext.html, http://link.springer.com/content/pdf/10.1186/1471-2105-10-305.pdf
2021 IEEE 9th International Conference on Bioinformatics and Computational Biology (ICBCB)10.1109/icbcb52223.2021.94592152021Analyzing Genomic Features with Predictive Chromatin Interaction Models: A Comprehensive EvaluationYi Kou, Daniel Zhaohttp://xplorestaging.ieee.org/ielx7/9458945/9459199/09459215.pdf?arnumber=9459215
BMC Bioinformatics10.1186/1471-2105-11-3412010111TagCleaner: Identification and removal of tag sequences from genomic and metagenomic datasetsRobert Schmieder, Yan Wei Lim, Forest Rohwer, Robert Edwardshttp://link.springer.com/content/pdf/10.1186/1471-2105-11-341.pdf, http://link.springer.com/article/10.1186/1471-2105-11-341/fulltext.html, http://link.springer.com/content/pdf/10.1186/1471-2105-11-341.pdf
Bioinformatics10.1093/bioinformatics/btx80820173491457-1465Analyzing large scale genomic data on the cloud with SparkhitLiren Huang, Jan Krüger, Alexander Sczyrbahttps://academic.oup.com/bioinformatics/article-pdf/34/9/1457/48916245/bioinformatics_34_9_1457.pdf, https://academic.oup.com/bioinformatics/article-pdf/34/9/1457/48916245/bioinformatics_34_9_1457.pdf
IEEE/ACM Transactions on Computational Biology and Bioinformatics10.1109/tcbb.2016.257644720171461251-1264Data Management for Heterogeneous Genomic DatasetsStefano Ceri, Abdulrahman Kaitoua, Marco Masseroli, Pietro Pinoli, Francesco Vencohttp://xplorestaging.ieee.org/ielx7/8857/8169258/07484654.pdf?arnumber=7484654
BMC Bioinformatics10.1186/s12859-016-0891-22016171DNAism: exploring genomic datasets on the web with Horizon ChartsDavid Rio Deiros, Richard A. Gibbs, Jeffrey Rogershttp://link.springer.com/content/pdf/10.1186/s12859-016-0891-2.pdf, http://link.springer.com/article/10.1186/s12859-016-0891-2/fulltext.html, http://link.springer.com/content/pdf/10.1186/s12859-016-0891-2, http://link.springer.com/content/pdf/10.1186/s12859-016-0891-2.pdf