PublisherDOIYearVolumeIssuePageTitleAuthor(s)Link
Genomics & Informatics10.5808/gi.2019.17.4.e402019174e40Analysis of unmapped regions associated with long deletions in Korean whole genome sequences based on short read dataYuna Lee, Kiejung Park, Insong Kohhttp://genominfo.org/upload/pdf/gi-2019-17-4-e40.pdf, http://genominfo.org/journal/view.php?doi=10.5808/GI.2019.17.4.e40, http://genominfo.org/upload/pdf/gi-2019-17-4-e40.pdf
Genes & Genomics10.1007/s13258-015-0370-62015382179-192Identification of transposable element-mediated deletions in 27 Korean individuals based on whole genome sequencing dataJungsu Ha, Wooseok Lee, Seyoung Mun, Yun-Ji Kim, Kyudong Hanhttp://link.springer.com/content/pdf/10.1007/s13258-015-0370-6.pdf, http://link.springer.com/article/10.1007/s13258-015-0370-6/fulltext.html, http://link.springer.com/content/pdf/10.1007/s13258-015-0370-6
Genome Biology10.1186/s13059-021-02447-32021221Straglr: discovering and genotyping tandem repeat expansions using whole genome long-read sequencesReadman Chiu, Indhu-Shree Rajan-Babu, Jan M. Friedman, Inanc Birolhttps://link.springer.com/content/pdf/10.1186/s13059-021-02447-3.pdf, https://link.springer.com/article/10.1186/s13059-021-02447-3/fulltext.html, https://link.springer.com/content/pdf/10.1186/s13059-021-02447-3.pdf
10.21203/rs.3.rs-1862557/v12022Gene Coverage Count and Classification (GC3): a locus sequence coverage assessment tool using short-read whole genome sequencing data, and its application to identify and classify histidine-rich protein 2 and 3 deletions in Plasmodium falciparumThomas C. Stabler, Ankit Dwivedi, Biraj Shrestha, Sudhaunshu Joshi, Tobias Schindler, Amed Ouattara, Guillermo A. GarcĂ­a, Claudia Daubenberger, Joana C. Silvahttps://www.researchsquare.com/article/rs-1862557/v1, https://www.researchsquare.com/article/rs-1862557/v1.html
Microbiology Resource Announcements10.1128/mra.00975-192019838Complete Genome Sequences of Four Salmonella enterica Strains Associated with Pistachios Assembled Using a Combination of Short- and Long-Read SequencingJulie Haendiges, Narjol Gonzalez-Escalona, Jesse D. Miller, Maria Hoffmannhttps://journals.asm.org/doi/pdf/10.1128/MRA.00975-19, https://journals.asm.org/doi/pdf/10.1128/MRA.00975-19
Genomics10.1016/0888-7543(89)90273-5198944505-508Pulsed-field gel analysis of human immunoglobulin heavy-chain constant region gene deletions reveals the extent of unmapped regions within the locusAndrea Bottaro, Mario de Marchi, Nicola Migone, Angelo O. Carbonarahttps://api.elsevier.com/content/article/PII:0888754389902735?httpAccept=text/xml, https://api.elsevier.com/content/article/PII:0888754389902735?httpAccept=text/plain
BMC Genomics10.1186/s12864-015-1412-92015161Whole-genome analysis of Fusarium graminearum insertional mutants identifies virulence associated genes and unmasks untagged chromosomal deletionsMartin Urban, Robert King, Keywan Hassani-Pak, Kim E Hammond-Kosackhttp://link.springer.com/article/10.1186/s12864-015-1412-9/fulltext.html, http://link.springer.com/content/pdf/10.1186/s12864-015-1412-9.pdf, http://link.springer.com/content/pdf/10.1186/s12864-015-1412-9, https://link.springer.com/content/pdf/10.1186/s12864-015-1412-9.pdf
Springer Protocols Handbooks10.1007/978-1-0716-1728-1_292022207-220Nanopore-Based Long-Read Sequencing Technology to Obtain Highly Contiguous Whole-Genome Sequence of Actinobacterial Genomes like Streptomyces Sp.: A Complete Guide for Actinobacterial Whole Genome Sequencing Project Using NanoporeSankaranarayanan Gomathinayagam, Loganathan Karthik, Kodiveri Muthukaliannan Gothandamhttps://link.springer.com/content/pdf/10.1007/978-1-0716-1728-1_29
Genome Biology10.1186/s13059-020-1935-52020211Opportunities and challenges in long-read sequencing data analysisShanika L. Amarasinghe, Shian Su, Xueyi Dong, Luke Zappia, Matthew E. Ritchie, Quentin Gouilhttp://link.springer.com/content/pdf/10.1186/s13059-020-1935-5.pdf, http://link.springer.com/article/10.1186/s13059-020-1935-5/fulltext.html, http://link.springer.com/content/pdf/10.1186/s13059-020-1935-5.pdf
Knowledge-Based Systems10.1016/s0950-7051(01)00146-02002154243-250A data mining approach to discover unusual folding regions in genome sequencesShu-Yun Le, Wei-min Liu, Jacob V. Maizelhttps://api.elsevier.com/content/article/PII:S0950705101001460?httpAccept=text/xml, https://api.elsevier.com/content/article/PII:S0950705101001460?httpAccept=text/plain