PublisherDOIYearVolumeIssuePageTitleAuthor(s)Link
Genomics & Informatics10.5808/gi.2018.16.4.e242018164e24Evaluation of 16S rRNA Databases for Taxonomic Assignments Using a Mock CommunitySang-Cheol Park, Sungho Wonhttp://genominfo.org/upload/pdf/gi-2018-16-4-e24.pdf, http://genominfo.org/journal/view.php?doi=10.5808/GI.2018.16.4.e24, http://genominfo.org/upload/pdf/gi-2018-16-4-e24.pdf
GigaScience10.1093/gigascience/giy054201875Benchmarking taxonomic assignments based on 16S rRNA gene profiling of the microbiota from commonly sampled environmentsAlexandre Almeida, Alex L Mitchell, Aleksandra Tarkowska, Robert D Finnhttp://academic.oup.com/gigascience/article-pdf/7/5/giy054/24852917/giy054.pdf
Diversity10.3390/d20710152010271015-1025TaxCollector: Modifying Current 16S rRNA Databases for the Rapid Classification at Six Taxonomic LevelsAdriana Giongo, Austin G. Davis-Richardson, David B. Crabb, Eric W. Tripletthttp://www.mdpi.com/1424-2818/2/7/1015/pdf
PLoS ONE10.1371/journal.pone.0053608201381e53608Taxonomic Classification of Bacterial 16S rRNA Genes Using Short Sequencing Reads: Evaluation of Effective Study DesignsOrna Mizrahi-Man, Emily R. Davenport, Yoav Giladhttp://dx.plos.org/10.1371/journal.pone.0053608
10.21203/rs.3.rs-961238/v12021Influence of 16S rRNA Reference Databases in Amplicon-Based Environmental Microbiome ResearchMeganathan P. Ramakodihttps://www.researchsquare.com/article/rs-961238/v1, https://www.researchsquare.com/article/rs-961238/v1.html
PeerJ10.7717/peerj.503020186e5030Taxonomy annotation and guide tree errors in 16S rRNA databasesRobert Edgarhttps://peerj.com/articles/5030.pdf, https://peerj.com/articles/5030.xml, https://peerj.com/articles/5030.html, https://peerj.com/articles/5030.pdf
Journal of Computational Biology10.1089/cmb.2015.02142016234229-238bioOTU: An Improved Method for Simultaneous Taxonomic Assignments and Operational Taxonomic Units Clustering of 16s rRNA Gene SequencesShi-Yi Chen, Feilong Deng, Ying Huang, Xianbo Jia, Yi-Ping Liu, Song-Jia Laihttp://www.liebertpub.com/doi/full-xml/10.1089/cmb.2015.0214, http://www.liebertpub.com/doi/pdf/10.1089/cmb.2015.0214
Microbiome10.1186/s40168-020-00900-2202081Ultrafast and accurate 16S rRNA microbial community analysis using Kraken 2Jennifer Lu, Steven L. Salzberghttps://link.springer.com/content/pdf/10.1186/s40168-020-00900-2.pdf, https://link.springer.com/article/10.1186/s40168-020-00900-2/fulltext.html, https://link.springer.com/content/pdf/10.1186/s40168-020-00900-2.pdf
The ISME Journal10.1038/ismej.2012.102201273457-460Secondary structure improves OTU assignments of 16S rRNA gene sequencesPatrick D Schlosshttp://www.nature.com/articles/ismej2012102.pdf, http://www.nature.com/articles/ismej2012102, http://www.nature.com/articles/ismej2012102.pdf
Journal of Phycology10.1111/j.1529-8817.2001.jpy37303-104.x20083740-41TAXONOMIC RESOLUTION OF LEPTOLYNGBYA (CYANOPHYTA) UTILIZING THE 16S rRNA GENE SEQUENCEhttps://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1529-8817.2001.jpy37303-104.x, http://onlinelibrary.wiley.com/wol1/doi/10.1111/j.1529-8817.2001.jpy37303-104.x/fullpdf