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| Evaluation of 16S rRNA Databases for Taxonomic Assignments Using a Mock Community |
| Sang-Cheol Park, Sungho Won |
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Genomics Inform. 2018;16(4):e24 Published online December 28, 2018 DOI: https://doi.org/10.5808/GI.2018.16.4.e24 |
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Evaluation of 16S rRNA Databases for Taxonomic Assignments Using a Mock Community Genomics & Informatics. 2018;16(4):e24  Benchmarking taxonomic assignments based on 16S rRNA gene profiling of the microbiota from commonly sampled environments GigaScience. 2018;7(5): TaxCollector: Modifying Current 16S rRNA Databases for the Rapid Classification at Six Taxonomic Levels Diversity. 2010;2(7):1015-1025 Taxonomic Classification of Bacterial 16S rRNA Genes Using Short Sequencing Reads: Evaluation of Effective Study Designs PLoS ONE. 2013;8(1):e53608 Influence of 16S rRNA Reference Databases in Amplicon-Based Environmental Microbiome Research . 2021; bioOTU: An Improved Method for Simultaneous Taxonomic Assignments and Operational Taxonomic Units Clustering of 16s rRNA Gene Sequences Journal of Computational Biology. 2016;23(4):229-238 Taxonomy annotation and guide tree errors in 16S rRNA databases PeerJ. 2018;6:e5030 Ultrafast and accurate 16S rRNA microbial community analysis using Kraken 2 Microbiome. 2020;8(1): TAXONOMIC RESOLUTION OF LEPTOLYNGBYA (CYANOPHYTA) UTILIZING THE 16S rRNA GENE SEQUENCE Journal of Phycology. 2008;37:40-41 A perspective on 16S rRNA operational taxonomic unit clustering using sequence similarity npj Biofilms and Microbiomes. 2016;2(1): |
