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Editorial
- Editor’s introduction to the special issue of the 6th Biomedical Linked Annotation Hackathon (BLAH6)
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Jin-Dong Kim
, Kevin Bretonnel Cohen
, Fabio Rinaldi
, Zhiyong Lu, Nigel Collier
, Hyun-Seok Park
- Genomics Inform. 2020;18(2):e12. Published online June 24, 2020
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Review article
- Using the PubAnnotation ecosystem to perform agile text mining on Genomics & Informatics: a tutorial review
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Hee-Jo Nam, Ryota Yamada, Hyun-Seok Park
- Genomics Inform. 2020;18(2):e13. Published online June 16, 2020
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Original articles
- WTO, an ontology for wheat traits and phenotypes in scientific publications
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Claire Nédellec
, Liliana Ibanescu, Robert Bossy, Pierre Sourdille - Genomics Inform. 2020;18(2):e14. Published online June 16, 2020
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- Extending TextAE for annotation of non-contiguous entities
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Jake Lever, Russ Altman, Jin-Dong Kim
- Genomics Inform. 2020;18(2):e15. Published online June 15, 2020
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Application notes
- Social Media Mining Toolkit (SMMT)
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Ramya Tekumalla, Juan M. Banda
- Genomics Inform. 2020;18(2):e16. Published online June 15, 2020
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- A proof-of-concept study of extracting patient histories for rare/intractable diseases from social media
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Atsuko Yamaguchi, Núria Queralt-Rosinach
- Genomics Inform. 2020;18(2):e17. Published online June 18, 2020
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- Integration of the PubAnnotation ecosystem in the development of a web-based search tool for alternative methods
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Mariana Neves
- Genomics Inform. 2020;18(2):e18. Published online June 15, 2020
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- Enabling a fast annotation process with the Table2Annotation tool
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Pierre Larmande, Kazim Muhammed Jibril
- Genomics Inform. 2020;18(2):e19. Published online June 15, 2020
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- Improving accessibility and distinction between negative results in biomedical relation extraction
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Diana Sousa
, Andre Lamurias, Francisco M. Couto - Genomics Inform. 2020;18(2):e20. Published online June 15, 2020
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- SciBabel: a system for crowd-sourced validation of automatic translations of scientific texts
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Felipe Soares, Rozane Rebechi
, Mark Stevenson - Genomics Inform. 2020;18(2):e21. Published online June 15, 2020
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Supplementary Material
- open-japanese-mesh: assigning MeSH UIDs to Japanese medical terms via open Japanese-English glossaries
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Ryota Yamada, Yuka Tatieisi
- Genomics Inform. 2020;18(2):e22. Published online June 16, 2020
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- Choosing preferable labels for the Japanese translation of the Human Phenotype Ontology
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Kota Ninomiya, Terue Takatsuki, Tatsuya Kushida, Yasunori Yamamoto, Soichi Ogishima
- Genomics Inform. 2020;18(2):e23. Published online June 18, 2020
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Opinion
- An empirical evaluation of electronic annotation tools for Twitter data
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Davy Weissenbacher, Karen O'Connor, Aiko T. Hiraki, Jin-Dong Kim, Graciela Gonzalez-Hernandez
- Genomics Inform. 2020;18(2):e24. Published online June 17, 2020
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